mantidimaging.core.io.instrument_log module

class mantidimaging.core.io.instrument_log.BaseParser(lines: list[str])

Bases: ABC

Base class for parsers

cleaned_lines() → list[str]

abstract classmethod match(lines: list[str], filename: str) → bool

Check if the name and content of the file is likely to be readable by this parser.

abstract parse()

Parse the log file

class mantidimaging.core.io.instrument_log.InstrumentLog(lines: list[str], source_file: Path)

Bases: object

Multiformat instrument log reader

New parsers can be implemented by subclassing InstrumentLogParser

counts() → Counts

data: dict[LogColumn, list[float | int]]

get_column(key: LogColumn) → list[float]

has_projection_angles() → bool

length: int

parse() → None

parser: type[InstrumentLogParser]

parsers: ClassVar[list[type[InstrumentLogParser]]] = [<class 'mantidimaging.core.io.instrument_log_implmentations.LegacySpectraLogParser'>, <class 'mantidimaging.core.io.instrument_log_implmentations.LegacyIMATLogFile'>]

projection_angles() → ProjectionAngles

projection_numbers() → ndarray

raise_if_angle_missing(image_filenames: list[str]) → None

classmethod register_parser(parser: type[InstrumentLogParser]) → None

class mantidimaging.core.io.instrument_log.InstrumentLogParser(lines: list[str])

Bases: BaseParser

A base class for parsing instrument log files.

This class provides a template for parsing instrument log files. Subclasses should implement the parse method to define the specific parsing logic.

Attributes:

None

Methods:

parse: Parse the log file and return the parsed data.

abstract parse() → dict[LogColumn, list[float | int]]

Parse the log file

class mantidimaging.core.io.instrument_log.InstrumentShutterCountParser(lines: list[str])

Bases: BaseParser

A parser for instrument shutter count logs.

This class is responsible for parsing instrument shutter count log files and returning the parsed shutter count data.

Attributes:

None

Methods:

parse: Parse the log file and return the shutter count data.

abstract parse() → dict[ShutterCountColumn, list[float | int]]

Parse the log file and return the shutter count data

exception mantidimaging.core.io.instrument_log.InvalidLog

Bases: RuntimeError

class mantidimaging.core.io.instrument_log.LogColumn(value, names=<not given>, *values, module=None, qualname=None, type=None, start=1, boundary=None)

Bases: Enum

COUNTS_AFTER = 6

COUNTS_BEFORE = 5

IMAGE_TYPE_IMAGE_COUNTER = 2

PROJECTION_ANGLE = 4

PROJECTION_NUMBER = 3

SPECTRUM_COUNTS = 8

TIMESTAMP = 1

TIME_OF_FLIGHT = 7

exception mantidimaging.core.io.instrument_log.NoParserFound

Bases: RuntimeError

class mantidimaging.core.io.instrument_log.ShutterCount(lines: list[str], source_file: Path)

Bases: object

Represents a shutter count log.

Attributes:

parsers (ClassVar[list[type[InstrumentShutterCountParser]]]): List of registered parsers. parser (type[InstrumentShutterCountParser]): The parser used to parse the log. data (ShutterCountType): The parsed data from the log. length (int): The length of the log data.

Methods:

__init__(self, lines: list[str], source_file: Path): Initializes a new instance of the ShutterCount class. _find_parser(self) -> None: Finds the appropriate parser for the log. parse(self) -> None: Parses the log using the selected parser. register_parser(cls, parser: type[InstrumentShutterCountParser]) -> None: Registers a parser for the log. get_column(self, key: ShutterCountColumn) -> list[float | int]: Returns the specified column from the log data. pulse_per_shutter_range_numbers(self) -> np.array: Returns an array of pulse per shutter range numbers. has_Pulse(self) -> bool: Checks if the log contains the ‘PULSE’ column. raise_if_counts_missing(self): Raises an exception if the counts are missing in the log.

data: dict[ShutterCountColumn, list[float | int]]

get_column(key: ShutterCountColumn) → list[float | int]

has_Pulse() → bool

length: int

parse() → None

parser: type[InstrumentShutterCountParser]

parsers: ClassVar[list[type[InstrumentShutterCountParser]]] = [<class 'mantidimaging.core.io.instrument_log_implmentations.LegacyShutterCountLogParser'>]

pulse_per_shutter_range_numbers() → ndarray[Any, Any]

classmethod register_parser(parser: type[InstrumentShutterCountParser]) → None

class mantidimaging.core.io.instrument_log.ShutterCountColumn(value, names=<not given>, *values, module=None, qualname=None, type=None, start=1, boundary=None)

Bases: Enum

PULSE = 1

SHUTTER_COUNT = 2